Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Samm50Q8BGH2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Pck2-205ENSMUST00000226352 2784 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.07■□□□□ 0
Samm50Q8BGH2 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.07■□□□□ 0
Samm50Q8BGH2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Samm50Q8BGH2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Gm27847-201ENSMUST00000183711 107 ntBASIC15.06■□□□□ 0
Samm50Q8BGH2 Gm27375-201ENSMUST00000183799 107 ntBASIC15.06■□□□□ 0
Samm50Q8BGH2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Gm25857-201ENSMUST00000082788 129 ntBASIC15.06■□□□□ 0
Samm50Q8BGH2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Samm50Q8BGH2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Samm50Q8BGH2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.05■□□□□ 0
Samm50Q8BGH2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.05■□□□□ 0
Samm50Q8BGH2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Samm50Q8BGH2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm19931-201ENSMUST00000198920 368 ntBASIC15.05■□□□□ -0
Samm50Q8BGH2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.05■□□□□ -0
Samm50Q8BGH2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.05■□□□□ -0
Samm50Q8BGH2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Samm50Q8BGH2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Samm50Q8BGH2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.05■□□□□ -0
Samm50Q8BGH2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms