Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.93□□□□□ -0.5
Pif1Q80SX8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.93□□□□□ -0.5
Pif1Q80SX8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm12997-201ENSMUST00000120207 640 ntBASIC11.92□□□□□ -0.5
Pif1Q80SX8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.92□□□□□ -0.5
Pif1Q80SX8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.92□□□□□ -0.5
Pif1Q80SX8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms