Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gm43758-201ENSMUST00000199500 367 ntBASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gm45865-201ENSMUST00000211815 945 ntBASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh8Q7TSK3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Mir874-201ENSMUST00000104769 76 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms