Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubfd1Q78JW9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gm27320-201ENSMUST00000184892 109 ntBASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubfd1Q78JW9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm22323-201ENSMUST00000103832 109 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm26956-201ENSMUST00000182176 986 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm37259-201ENSMUST00000193903 849 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms