Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm15515-201ENSMUST00000117827 822 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm27438-201ENSMUST00000183480 110 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm19353-201ENSMUST00000184561 445 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm9230-201ENSMUST00000188228 532 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm42937-201ENSMUST00000197360 752 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm44126-201ENSMUST00000204831 514 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Gm44545-201ENSMUST00000208262 746 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx55Q6ZPL9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx55Q6ZPL9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms