Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gm15653-201ENSMUST00000119247 907 ntBASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf220Q6PDX6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Mir698-201ENSMUST00000102164 109 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm15693-201ENSMUST00000120470 637 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm24513-201ENSMUST00000174964 138 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm33320-201ENSMUST00000192232 530 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf220Q6PDX6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms