Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.46■□□□□ 0.22
Chd4Q6PDQ2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd4Q6PDQ2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chd4Q6PDQ2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Gm11667-201ENSMUST00000119828 486 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Gm12208-201ENSMUST00000122004 163 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Mir7032-201ENSMUST00000185154 79 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Mir7686-201ENSMUST00000200604 57 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd4Q6PDQ2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Gm12165-201ENSMUST00000117047 342 ntBASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd4Q6PDQ2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm9550-201ENSMUST00000161130 862 ntBASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm37835-201ENSMUST00000193305 361 ntBASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms