Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm28719-201ENSMUST00000187779 1757 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm22144-201ENSMUST00000157402 102 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm17831-201ENSMUST00000205579 900 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm9132-201ENSMUST00000210182 832 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slx4Q6P1D7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Gm14724-201ENSMUST00000118400 537 ntBASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Gm43520-201ENSMUST00000197996 164 ntBASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Gm5385-201ENSMUST00000118988 1559 ntBASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slx4Q6P1D7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Gm6905-201ENSMUST00000205729 511 ntBASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Mir8115-201ENSMUST00000184992 119 ntBASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Gm5852-201ENSMUST00000194119 1021 ntBASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Gm5542-201ENSMUST00000195485 1089 ntBASIC19.4■□□□□ 0.7
Slx4Q6P1D7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Slx4Q6P1D7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slx4Q6P1D7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Gm9072-201ENSMUST00000218390 1514 ntBASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slx4Q6P1D7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms