Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm22711-201ENSMUST00000116890 133 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm11801-201ENSMUST00000117807 746 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm11956-201ENSMUST00000119525 512 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm15566-201ENSMUST00000121130 590 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm37299-201ENSMUST00000193951 826 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.19■□□□□ 0.02
Col11a2Q64739 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm15352-201ENSMUST00000118696 270 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm5419-201ENSMUST00000119301 527 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm15744-201ENSMUST00000161734 213 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm12407-201ENSMUST00000180219 324 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.18■□□□□ 0.02
Col11a2Q64739 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm5705-201ENSMUST00000066241 711 ntBASIC15.18■□□□□ 0.02
Col11a2Q64739 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col11a2Q64739 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col11a2Q64739 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm11511-201ENSMUST00000118146 540 ntBASIC15.17■□□□□ 0.02
Col11a2Q64739 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.17■□□□□ 0.02
Col11a2Q64739 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.17■□□□□ 0.02
Col11a2Q64739 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.17■□□□□ 0.02
Col11a2Q64739 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.17■□□□□ 0.02
Col11a2Q64739 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.17■□□□□ 0.02
Col11a2Q64739 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.17■□□□□ 0.02
Col11a2Q64739 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm1848-201ENSMUST00000120711 789 ntBASIC15.17■□□□□ 0.02
Col11a2Q64739 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col11a2Q64739 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.17■□□□□ 0.02
Col11a2Q64739 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col11a2Q64739 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms