Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfbr1Q64729 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfbr1Q64729 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfbr1Q64729 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfbr1Q64729 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm20445-201ENSMUST00000061905 565 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tgfbr1Q64729 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tgfbr1Q64729 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms