Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm22018-201ENSMUST00000104357 131 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm26185-201ENSMUST00000157692 266 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm28693-202ENSMUST00000190758 331 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm19184-201ENSMUST00000196798 928 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Sdc3Q64519 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.38□□□□□ -0.43
Sdc3Q64519 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.38□□□□□ -0.43
Sdc3Q64519 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc3Q64519 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc3Q64519 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.38□□□□□ -0.43
Sdc3Q64519 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Olfr582-201ENSMUST00000098212 960 ntBASIC12.38□□□□□ -0.43
Sdc3Q64519 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.38□□□□□ -0.43
Sdc3Q64519 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc3Q64519 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.38□□□□□ -0.43
Sdc3Q64519 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.37□□□□□ -0.43
Sdc3Q64519 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.37□□□□□ -0.43
Sdc3Q64519 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gm45331-201ENSMUST00000209868 554 ntBASIC12.37□□□□□ -0.43
Sdc3Q64519 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.37□□□□□ -0.43
Sdc3Q64519 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.37□□□□□ -0.43
Sdc3Q64519 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.37□□□□□ -0.43
Sdc3Q64519 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Sdc3Q64519 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc3Q64519 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms