Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.78□□□□□ -0.84
Zfp248Q640N4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.78□□□□□ -0.84
Zfp248Q640N4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.78□□□□□ -0.84
Zfp248Q640N4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.78□□□□□ -0.84
Zfp248Q640N4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Zfp248Q640N4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Zfp248Q640N4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Zfp248Q640N4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Zfp248Q640N4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Zfp248Q640N4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Zfp248Q640N4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Zfp248Q640N4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.77□□□□□ -0.84
Zfp248Q640N4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm5866-201ENSMUST00000177881 973 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Gm2423-201ENSMUST00000074863 733 ntBASIC9.77□□□□□ -0.85
Zfp248Q640N4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Zfp248Q640N4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms