Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm11246-201ENSMUST00000120880 345 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm22144-201ENSMUST00000157402 102 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm23218-201ENSMUST00000158124 276 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm44980-201ENSMUST00000205826 314 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn9aQ62205 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn9aQ62205 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn9aQ62205 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Scn9aQ62205 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm8100-201ENSMUST00000182906 988 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm37028-201ENSMUST00000194276 107 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.83□□□□□ -0.04
Scn9aQ62205 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn9aQ62205 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn9aQ62205 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm14724-201ENSMUST00000118400 537 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Mir1956-201ENSMUST00000157748 65 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn9aQ62205 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.82□□□□□ -0.04
Scn9aQ62205 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn9aQ62205 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.81□□□□□ -0.04
Scn9aQ62205 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Gm15595-201ENSMUST00000120840 961 ntBASIC14.81□□□□□ -0.04
Scn9aQ62205 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms