Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm27331-201ENSMUST00000183705 60 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx2Q61412 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm44069-201ENSMUST00000204898 506 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm29705-201ENSMUST00000212598 474 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vsx2Q61412 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.54□□□□□ -0.4
Vsx2Q61412 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx2Q61412 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.53□□□□□ -0.4
Vsx2Q61412 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Mir1982-201ENSMUST00000157368 74 ntBASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm29127-201ENSMUST00000188304 517 ntBASIC12.53□□□□□ -0.4
Vsx2Q61412 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.53□□□□□ -0.4
Vsx2Q61412 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx2Q61412 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vsx2Q61412 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.52□□□□□ -0.4
Vsx2Q61412 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Vsx2Q61412 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Vsx2Q61412 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx2Q61412 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Gm37922-201ENSMUST00000195596 455 ntBASIC12.52□□□□□ -0.41
Vsx2Q61412 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.52□□□□□ -0.41
Vsx2Q61412 Gm40466-201ENSMUST00000212174 422 ntBASIC12.52□□□□□ -0.41
Vsx2Q61412 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx2Q61412 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.52□□□□□ -0.41
Vsx2Q61412 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms