Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm11801-201ENSMUST00000117807 746 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm5419-201ENSMUST00000119301 527 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm28388-201ENSMUST00000186262 437 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm18304-201ENSMUST00000189162 546 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm44158-201ENSMUST00000203881 505 ntBASIC14.07□□□□□ -0.16
Col11a1Q61245 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.07□□□□□ -0.16
Col11a1Q61245 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col11a1Q61245 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm8731-201ENSMUST00000118088 412 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm7722-201ENSMUST00000120646 741 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Col11a1Q61245 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm21092-201ENSMUST00000178995 955 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm12407-201ENSMUST00000180219 324 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm28324-201ENSMUST00000187913 264 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm22711-201ENSMUST00000116890 133 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm11956-201ENSMUST00000119525 512 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm8737-201ENSMUST00000122208 642 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col11a1Q61245 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm25951-201ENSMUST00000175330 64 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms