Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm5356-201ENSMUST00000093326 615 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm8805-201ENSMUST00000117848 313 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm6244-201ENSMUST00000178732 841 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9794-201ENSMUST00000202370 423 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5d-4Q5R1F6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm8810-201ENSMUST00000172895 754 ntBASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms