Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm6539-201ENSMUST00000119157 1064 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3-3Q5R1C3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm7063-201ENSMUST00000186840 981 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm17968-201ENSMUST00000194902 784 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms