Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 AC167013.1-201ENSMUST00000228592 202 ntBASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Mir339-201ENSMUST00000083659 96 ntBASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm19863-201ENSMUST00000192480 2218 ntBASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm13736-201ENSMUST00000119272 253 ntBASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm27552-201ENSMUST00000183351 62 ntBASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm27844-201ENSMUST00000183613 62 ntBASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm45925-201ENSMUST00000218882 744 ntBASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim41Q5NCC3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC22.27■■□□□ 1.15
Trim41Q5NCC3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Trim41Q5NCC3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm8885-201ENSMUST00000189382 598 ntBASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm44405-201ENSMUST00000198952 126 ntBASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm9873-201ENSMUST00000063891 1097 ntBASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm37691-201ENSMUST00000192147 2573 ntBASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim41Q5NCC3 Gm15459-201ENSMUST00000117405 1941 ntBASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Gm8355-201ENSMUST00000177767 1941 ntBASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Gm16296-201ENSMUST00000159905 325 ntBASIC22.25■■□□□ 1.15
Trim41Q5NCC3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim41Q5NCC3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Trim41Q5NCC3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms