Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm23582-201ENSMUST00000158530 139 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm2566-201ENSMUST00000201267 431 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm9487-201ENSMUST00000216600 472 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm45133-201ENSMUST00000207548 2773 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm37207-201ENSMUST00000194284 296 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Gm9856-201ENSMUST00000217077 2578 ntBASIC7.37□□□□□ -1.23
Herc2Q4U2R1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm13505-201ENSMUST00000121666 817 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm8197-202ENSMUST00000193422 934 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm5451-201ENSMUST00000080545 579 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm30671-201ENSMUST00000214898 318 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm7405-201ENSMUST00000121476 1337 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm25830-201ENSMUST00000158923 132 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm38228-201ENSMUST00000193169 1293 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms