Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm22018-201ENSMUST00000104357 131 ntBASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap2Q3V1H1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 AY702102-202ENSMUST00000194651 1173 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm5186-201ENSMUST00000218781 920 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gm5781-201ENSMUST00000219792 443 ntBASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ckap2Q3V1H1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap2Q3V1H1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ckap2Q3V1H1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap2Q3V1H1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap2Q3V1H1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ckap2Q3V1H1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gm5187-201ENSMUST00000117317 991 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gm14760-201ENSMUST00000121831 999 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gm37424-201ENSMUST00000191727 561 ntBASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ckap2Q3V1H1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ckap2Q3V1H1 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms