Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mir7085-201ENSMUST00000184353 66 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim80Q3V061 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trim80Q3V061 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Mir874-201ENSMUST00000104769 76 ntBASIC13.31□□□□□ -0.28
Trim80Q3V061 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Gm15393-201ENSMUST00000120499 219 ntBASIC13.31□□□□□ -0.28
Trim80Q3V061 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim80Q3V061 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim80Q3V061 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trim80Q3V061 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.3□□□□□ -0.28
Trim80Q3V061 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Gm5354-201ENSMUST00000182417 973 ntBASIC13.3□□□□□ -0.28
Trim80Q3V061 Gm33320-201ENSMUST00000192232 530 ntBASIC13.3□□□□□ -0.28
Trim80Q3V061 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim80Q3V061 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim80Q3V061 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms