Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm12501-201ENSMUST00000119163 529 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Rmrp-201ENSMUST00000157463 271 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm37246-201ENSMUST00000192665 835 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm21811-201ENSMUST00000096485 930 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fam196aQ3USH1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Fam196aQ3USH1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms