Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsmem1Q3UQS2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm12502-201ENSMUST00000120197 444 ntBASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm8738-201ENSMUST00000172606 329 ntBASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm37008-201ENSMUST00000195712 319 ntBASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm19309-201ENSMUST00000218295 205 ntBASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsmem1Q3UQS2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm12957-201ENSMUST00000117835 377 ntBASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsmem1Q3UQS2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm43858-201ENSMUST00000199418 1778 ntBASIC13□□□□□ -0.33
Lsmem1Q3UQS2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm19184-201ENSMUST00000196798 928 ntBASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13□□□□□ -0.33
Lsmem1Q3UQS2 AC153962.4-201ENSMUST00000217878 242 ntBASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm5781-201ENSMUST00000219792 443 ntBASIC13□□□□□ -0.33
Lsmem1Q3UQS2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms