Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Gm21811-201ENSMUST00000096485 930 ntBASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Gm3052-202ENSMUST00000188254 2224 ntBASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC18.55■□□□□ 0.56
Arhgef40Q3UPH7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm13888-201ENSMUST00000119148 422 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm5778-201ENSMUST00000171003 1072 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm42682-201ENSMUST00000198349 1265 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.54■□□□□ 0.56
Arhgef40Q3UPH7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Gm7049-201ENSMUST00000223520 1712 ntBASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Gm23596-201ENSMUST00000104304 132 ntBASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Gm12501-201ENSMUST00000119163 529 ntBASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Gm8199-201ENSMUST00000121323 823 ntBASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef40Q3UPH7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Mir7686-201ENSMUST00000200604 57 ntBASIC18.52■□□□□ 0.56
Arhgef40Q3UPH7 Gm19287-201ENSMUST00000203190 358 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms