Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm22594-201ENSMUST00000104251 130 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm12314-201ENSMUST00000118104 538 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm7719-201ENSMUST00000182374 975 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm37458-201ENSMUST00000194055 410 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm43969-201ENSMUST00000204833 535 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm11956-201ENSMUST00000119525 512 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 BC106175-202ENSMUST00000219344 1213 ntBASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Gm14213-201ENSMUST00000119778 768 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.73□□□□□ -0.53
Spg11Q3UHA3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms