Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Gm32999-201ENSMUST00000192693 562 ntBASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Puf60Q3UEB3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Gm45598-202ENSMUST00000210719 986 ntBASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Puf60Q3UEB3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gm27552-201ENSMUST00000183351 62 ntBASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gm27844-201ENSMUST00000183613 62 ntBASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Puf60Q3UEB3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Gm37986-201ENSMUST00000193285 383 ntBASIC17.52■□□□□ 0.4
Puf60Q3UEB3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Puf60Q3UEB3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms