Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Gm6244-201ENSMUST00000178732 841 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.1□□□□□ -0.47
Brf2Q3UAW9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms