Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm23062-201ENSMUST00000102349 110 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm23045-201ENSMUST00000175041 96 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm26134-201ENSMUST00000178484 110 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm38103-201ENSMUST00000191707 864 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm43962-201ENSMUST00000203898 190 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm12857-201ENSMUST00000117678 592 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm3726-201ENSMUST00000203110 785 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Wbp1-209ENSMUST00000205023 716 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.41□□□□□ -0.58
Chd8Q09XV5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
Chd8Q09XV5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm15626-201ENSMUST00000117478 868 ntBASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm11952-201ENSMUST00000121172 821 ntBASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm37851-201ENSMUST00000193871 889 ntBASIC11.4□□□□□ -0.58
Chd8Q09XV5 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.4□□□□□ -0.58
Chd8Q09XV5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.4□□□□□ -0.58
Chd8Q09XV5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd8Q09XV5 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms