Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm25890-201ENSMUST00000177643 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm22614-201ENSMUST00000178300 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm22042-201ENSMUST00000082989 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm26232-201ENSMUST00000083360 166 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm24136-201ENSMUST00000083374 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm26110-201ENSMUST00000083971 165 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.32□□□□□ -0.44
Hoxc4Q08624 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Gm13315-201ENSMUST00000120376 991 ntBASIC12.32□□□□□ -0.44
Hoxc4Q08624 Gm38317-201ENSMUST00000195564 343 ntBASIC12.32□□□□□ -0.44
Hoxc4Q08624 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.32□□□□□ -0.44
Hoxc4Q08624 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.32□□□□□ -0.44
Hoxc4Q08624 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc4Q08624 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxc4Q08624 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm14109-201ENSMUST00000118814 309 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm14999-201ENSMUST00000121039 624 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm13570-201ENSMUST00000140763 309 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm15276-201ENSMUST00000145953 498 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm8712-201ENSMUST00000221090 701 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm10076-201ENSMUST00000073238 384 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.31□□□□□ -0.44
Hoxc4Q08624 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms