Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC19.28■□□□□ 0.68
Col17a1Q07563 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col17a1Q07563 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col17a1Q07563 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col17a1Q07563 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col17a1Q07563 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col17a1Q07563 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col17a1Q07563 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col17a1Q07563 Gm23272-201ENSMUST00000104053 129 ntBASIC19.27■□□□□ 0.67
Col17a1Q07563 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm11511-201ENSMUST00000118146 540 ntBASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col17a1Q07563 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC19.27■□□□□ 0.67
Col17a1Q07563 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm44506-201ENSMUST00000206278 965 ntBASIC19.27■□□□□ 0.67
Col17a1Q07563 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC19.27■□□□□ 0.67
Col17a1Q07563 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col17a1Q07563 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col17a1Q07563 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Gm8824-201ENSMUST00000182962 990 ntBASIC19.26■□□□□ 0.67
Col17a1Q07563 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC19.26■□□□□ 0.67
Col17a1Q07563 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col17a1Q07563 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col17a1Q07563 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm12791-201ENSMUST00000120788 655 ntBASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm22379-201ENSMUST00000157480 131 ntBASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm24328-201ENSMUST00000175104 67 ntBASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col17a1Q07563 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col17a1Q07563 AC130823.1-201ENSMUST00000228929 1549 ntBASIC19.25■□□□□ 0.67
Col17a1Q07563 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC19.24■□□□□ 0.67
Col17a1Q07563 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Col17a1Q07563 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC19.24■□□□□ 0.67
Col17a1Q07563 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col17a1Q07563 Gm44814-201ENSMUST00000207018 434 ntBASIC19.24■□□□□ 0.67
Col17a1Q07563 Gm2448-201ENSMUST00000207080 559 ntBASIC19.24■□□□□ 0.67
Col17a1Q07563 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms