Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Msx2Q03358 Daam2-202ENSMUST00000224595 1926 ntBASIC12.47□□□□□ -0.41
Msx2Q03358 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Msx2Q03358 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx2Q03358 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.46□□□□□ -0.41
Msx2Q03358 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Msx2Q03358 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.46□□□□□ -0.41
Msx2Q03358 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Gm6447-201ENSMUST00000118905 835 ntBASIC12.46□□□□□ -0.41
Msx2Q03358 Gm14767-201ENSMUST00000121559 586 ntBASIC12.46□□□□□ -0.41
Msx2Q03358 Gm15376-201ENSMUST00000122258 783 ntBASIC12.46□□□□□ -0.41
Msx2Q03358 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.46□□□□□ -0.41
Msx2Q03358 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.46□□□□□ -0.41
Msx2Q03358 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx2Q03358 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx2Q03358 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Msx2Q03358 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.46□□□□□ -0.42
Msx2Q03358 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx2Q03358 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Msx2Q03358 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msx2Q03358 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Msx2Q03358 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Msx2Q03358 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Msx2Q03358 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.45□□□□□ -0.42
Msx2Q03358 Gm38144-201ENSMUST00000192790 465 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.45□□□□□ -0.42
Msx2Q03358 Gm7775-201ENSMUST00000218871 853 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msx2Q03358 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx2Q03358 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.45□□□□□ -0.42
Msx2Q03358 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Msx2Q03358 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Msx2Q03358 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Msx2Q03358 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.44□□□□□ -0.42
Msx2Q03358 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Msx2Q03358 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx2Q03358 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.44□□□□□ -0.42
Msx2Q03358 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms