Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm13342-201ENSMUST00000121055 207 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a2Q02788 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Mospd4-201ENSMUST00000180618 576 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Cts7-204ENSMUST00000225321 1257 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.83□□□□□ -0.36
Col6a2Q02788 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a2Q02788 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a2Q02788 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm2991-201ENSMUST00000173338 480 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm44364-201ENSMUST00000198368 141 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm3961-201ENSMUST00000204425 994 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm5904-201ENSMUST00000210286 865 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a2Q02788 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.82□□□□□ -0.36
Col6a2Q02788 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a2Q02788 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a2Q02788 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a2Q02788 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a2Q02788 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms