Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Gm46209-201ENSMUST00000217912 553 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Npas1P97459 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Npas1P97459 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.8□□□□□ -0.68
Npas1P97459 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Npas1P97459 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Npas1P97459 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Npas1P97459 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Npas1P97459 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gm6912-201ENSMUST00000117218 544 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Gm15770-201ENSMUST00000117498 584 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Gm6415-201ENSMUST00000118488 348 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.79□□□□□ -0.68
Npas1P97459 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gm24158-201ENSMUST00000175263 71 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.79□□□□□ -0.68
Npas1P97459 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.79□□□□□ -0.68
Npas1P97459 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Npas1P97459 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Npas1P97459 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Npas1P97459 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.78□□□□□ -0.68
Npas1P97459 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Npas1P97459 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.78□□□□□ -0.68
Npas1P97459 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms