Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
PrkdcP97313 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Gm9025-201ENSMUST00000122415 1575 ntBASIC8.46□□□□□ -1.05
PrkdcP97313 AC113060.1-201ENSMUST00000225689 1573 ntBASIC8.46□□□□□ -1.05
PrkdcP97313 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.46□□□□□ -1.06
PrkdcP97313 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
PrkdcP97313 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm44958-201ENSMUST00000203734 736 ntBASIC8.46□□□□□ -1.06
PrkdcP97313 Gm18123-201ENSMUST00000210874 822 ntBASIC8.46□□□□□ -1.06
PrkdcP97313 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC8.46□□□□□ -1.06
PrkdcP97313 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
PrkdcP97313 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
PrkdcP97313 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC8.46□□□□□ -1.06
PrkdcP97313 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm44891-201ENSMUST00000208817 2223 ntBASIC8.46□□□□□ -1.06
PrkdcP97313 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm26982-201ENSMUST00000182250 1151 ntBASIC8.46□□□□□ -1.06
PrkdcP97313 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC8.46□□□□□ -1.06
PrkdcP97313 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC8.46□□□□□ -1.06
PrkdcP97313 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Gm6655-201ENSMUST00000201932 1309 ntBASIC8.46□□□□□ -1.06
PrkdcP97313 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PrkdcP97313 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm10169-201ENSMUST00000121822 348 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm13981-201ENSMUST00000122360 447 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm24943-201ENSMUST00000158329 433 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm17192-201ENSMUST00000169031 511 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm8197-202ENSMUST00000193422 934 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm37782-201ENSMUST00000194879 678 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm45342-201ENSMUST00000210903 1363 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm9661-201ENSMUST00000221611 1122 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC8.45□□□□□ -1.06
PrkdcP97313 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Gm25554-201ENSMUST00000158075 113 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Gm43852-201ENSMUST00000202098 917 ntBASIC8.45□□□□□ -1.06
PrkdcP97313 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
PrkdcP97313 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms