Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm7029-201ENSMUST00000173226 450 ntBASIC11.48□□□□□ -0.57
SgcbP82349 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SgcbP82349 Gm37042-201ENSMUST00000193816 581 ntBASIC11.48□□□□□ -0.57
SgcbP82349 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgcbP82349 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcbP82349 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.48□□□□□ -0.57
SgcbP82349 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SgcbP82349 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SgcbP82349 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.47□□□□□ -0.57
SgcbP82349 Gm8062-201ENSMUST00000139696 444 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.47□□□□□ -0.57
SgcbP82349 Gm22119-201ENSMUST00000175594 99 ntBASIC11.47□□□□□ -0.57
SgcbP82349 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Gm37424-201ENSMUST00000191727 561 ntBASIC11.47□□□□□ -0.57
SgcbP82349 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.47□□□□□ -0.57
SgcbP82349 Gm18041-201ENSMUST00000218210 618 ntBASIC11.47□□□□□ -0.57
SgcbP82349 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SgcbP82349 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcbP82349 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcbP82349 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.46□□□□□ -0.57
SgcbP82349 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SgcbP82349 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SgcbP82349 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Gm23958-201ENSMUST00000157207 105 ntBASIC11.46□□□□□ -0.57
SgcbP82349 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.46□□□□□ -0.57
SgcbP82349 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.46□□□□□ -0.57
SgcbP82349 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.46□□□□□ -0.57
SgcbP82349 Gm37008-201ENSMUST00000195712 319 ntBASIC11.46□□□□□ -0.57
SgcbP82349 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms