Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.11□□□□□ -0.63
Atf1P81269 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atf1P81269 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atf1P81269 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Gm12291-201ENSMUST00000121627 311 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Gm12091-201ENSMUST00000146791 830 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf1P81269 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atf1P81269 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Atf1P81269 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.11□□□□□ -0.63
Atf1P81269 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf1P81269 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Atf1P81269 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Atf1P81269 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.1□□□□□ -0.63
Atf1P81269 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Atf1P81269 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Atf1P81269 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.1□□□□□ -0.63
Atf1P81269 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.1□□□□□ -0.63
Atf1P81269 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Gm7287-201ENSMUST00000205267 602 ntBASIC11.1□□□□□ -0.63
Atf1P81269 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.1□□□□□ -0.63
Atf1P81269 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atf1P81269 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf1P81269 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf1P81269 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms