Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.92□□□□□ -0.18
CiitaP79621 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CiitaP79621 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CiitaP79621 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CiitaP79621 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm13736-201ENSMUST00000119272 253 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Gm5904-201ENSMUST00000210286 865 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Gm5950-201ENSMUST00000213337 772 ntBASIC13.91□□□□□ -0.18
CiitaP79621 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
CiitaP79621 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CiitaP79621 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.91□□□□□ -0.18
CiitaP79621 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.91□□□□□ -0.18
CiitaP79621 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CiitaP79621 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CiitaP79621 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CiitaP79621 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CiitaP79621 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gm13875-201ENSMUST00000120162 282 ntBASIC13.9□□□□□ -0.18
CiitaP79621 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CiitaP79621 Gm18041-201ENSMUST00000218210 618 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CiitaP79621 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CiitaP79621 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Rubie-203ENSMUST00000227803 2430 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.9□□□□□ -0.18
CiitaP79621 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CiitaP79621 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.9□□□□□ -0.19
CiitaP79621 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CiitaP79621 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CiitaP79621 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.9□□□□□ -0.19
CiitaP79621 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.19
CiitaP79621 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.89□□□□□ -0.19
CiitaP79621 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CiitaP79621 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms