Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.67□□□□□ -0.38
Shox2P70390 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Shox2P70390 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.67□□□□□ -0.38
Shox2P70390 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Gm14760-201ENSMUST00000121831 999 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.67□□□□□ -0.38
Shox2P70390 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.67□□□□□ -0.38
Shox2P70390 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shox2P70390 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.67□□□□□ -0.38
Shox2P70390 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Shox2P70390 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shox2P70390 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shox2P70390 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shox2P70390 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Shox2P70390 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Shox2P70390 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shox2P70390 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.66□□□□□ -0.38
Shox2P70390 Gm18889-201ENSMUST00000174284 929 ntBASIC12.66□□□□□ -0.38
Shox2P70390 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.66□□□□□ -0.38
Shox2P70390 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.66□□□□□ -0.38
Shox2P70390 Gm2651-201ENSMUST00000203560 838 ntBASIC12.66□□□□□ -0.38
Shox2P70390 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shox2P70390 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Shox2P70390 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shox2P70390 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Shox2P70390 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms