Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Msx3P70354 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.21□□□□□ -0.29
Msx3P70354 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Gm8805-201ENSMUST00000117848 313 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Gm12203-201ENSMUST00000118235 598 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Gm12209-201ENSMUST00000120089 596 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx3P70354 Gm27892-201ENSMUST00000185017 106 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Mir339-201ENSMUST00000083659 96 ntBASIC13.21□□□□□ -0.29
Msx3P70354 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx3P70354 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Msx3P70354 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Msx3P70354 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Msx3P70354 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Msx3P70354 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Msx3P70354 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Gm11814-201ENSMUST00000119515 929 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Gm16479-201ENSMUST00000121706 932 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Gm37042-201ENSMUST00000193816 581 ntBASIC13.2□□□□□ -0.3
Msx3P70354 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.2□□□□□ -0.3
Msx3P70354 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Gm10012-201ENSMUST00000078252 192 ntBASIC13.2□□□□□ -0.3
Msx3P70354 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.2□□□□□ -0.3
Msx3P70354 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx3P70354 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.19□□□□□ -0.3
Msx3P70354 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gm15806-201ENSMUST00000120696 955 ntBASIC13.19□□□□□ -0.3
Msx3P70354 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gm26185-201ENSMUST00000157692 266 ntBASIC13.19□□□□□ -0.3
Msx3P70354 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gm22121-201ENSMUST00000175148 54 ntBASIC13.19□□□□□ -0.3
Msx3P70354 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Msx3P70354 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.19□□□□□ -0.3
Msx3P70354 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Msx3P70354 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms