Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.68□□□□□ -0.54
Lsm3P62311 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Gm6912-201ENSMUST00000117218 544 ntBASIC11.68□□□□□ -0.54
Lsm3P62311 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm3P62311 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.68□□□□□ -0.54
Lsm3P62311 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.68□□□□□ -0.54
Lsm3P62311 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm3P62311 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.68□□□□□ -0.54
Lsm3P62311 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm3P62311 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Lsm3P62311 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm13015-201ENSMUST00000118674 204 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Lsm3P62311 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm5864-201ENSMUST00000202263 970 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Dupd1-202ENSMUST00000224735 548 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Lsm3P62311 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.67□□□□□ -0.54
Lsm3P62311 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm3P62311 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm3P62311 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lsm3P62311 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms