Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm11478-201ENSMUST00000117851 599 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.34□□□□□ -0.59
Sec61a1P61620 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm19078-201ENSMUST00000206311 727 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a1P61620 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.34□□□□□ -0.59
Sec61a1P61620 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.34□□□□□ -0.59
Sec61a1P61620 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a1P61620 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a1P61620 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sec61a1P61620 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Sec61a1P61620 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.33□□□□□ -0.6
Sec61a1P61620 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Gm28911-201ENSMUST00000188837 117 ntBASIC11.33□□□□□ -0.6
Sec61a1P61620 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.33□□□□□ -0.6
Sec61a1P61620 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.33□□□□□ -0.6
Sec61a1P61620 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a1P61620 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a1P61620 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms