Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup43P59235 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.14□□□□□ -0.47
Nup43P59235 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Nup43P59235 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup43P59235 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nup43P59235 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.14□□□□□ -0.47
Nup43P59235 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.14□□□□□ -0.47
Nup43P59235 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.14□□□□□ -0.47
Nup43P59235 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.14□□□□□ -0.47
Nup43P59235 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup43P59235 Gm23363-201ENSMUST00000175024 79 ntBASIC12.14□□□□□ -0.47
Nup43P59235 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.14□□□□□ -0.47
Nup43P59235 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.14□□□□□ -0.47
Nup43P59235 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Nup43P59235 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nup43P59235 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.14□□□□□ -0.47
Nup43P59235 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nup43P59235 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Nup43P59235 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup43P59235 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup43P59235 Snora78-201ENSMUST00000158630 128 ntBASIC12.13□□□□□ -0.47
Nup43P59235 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.13□□□□□ -0.47
Nup43P59235 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Nup43P59235 Mir339-201ENSMUST00000083659 96 ntBASIC12.13□□□□□ -0.47
Nup43P59235 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nup43P59235 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup43P59235 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup43P59235 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nup43P59235 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Nup43P59235 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Snord83b-201ENSMUST00000104546 94 ntBASIC12.12□□□□□ -0.47
Nup43P59235 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Gm13813-201ENSMUST00000120998 787 ntBASIC12.12□□□□□ -0.47
Nup43P59235 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup43P59235 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms