Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm2P58774 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm2P58774 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Tpm2P58774 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm22175-201ENSMUST00000175007 78 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm27680-201ENSMUST00000184192 160 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.79□□□□□ -0.04
Tpm2P58774 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tpm2P58774 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm6888-201ENSMUST00000221983 706 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Tpm2P58774 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.79□□□□□ -0.04
Tpm2P58774 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.78□□□□□ -0.04
Tpm2P58774 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.78□□□□□ -0.04
Tpm2P58774 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.78□□□□□ -0.04
Tpm2P58774 Gm17837-201ENSMUST00000186435 985 ntBASIC14.78□□□□□ -0.04
Tpm2P58774 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tpm2P58774 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.78□□□□□ -0.04
Tpm2P58774 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tpm2P58774 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm2P58774 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.77□□□□□ -0.04
Tpm2P58774 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Tpm2P58774 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.77□□□□□ -0.04
Tpm2P58774 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Tpm2P58774 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm2P58774 Gm15678-201ENSMUST00000117573 960 ntBASIC14.77□□□□□ -0.05
Tpm2P58774 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.77□□□□□ -0.05
Tpm2P58774 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.77□□□□□ -0.05
Tpm2P58774 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.77□□□□□ -0.05
Tpm2P58774 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Tpm2P58774 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.77□□□□□ -0.05
Tpm2P58774 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm2P58774 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms