Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.19■□□□□ 0.18
Msh6P54276 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.19■□□□□ 0.18
Msh6P54276 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Msh6P54276 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.18■□□□□ 0.18
Msh6P54276 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.18■□□□□ 0.18
Msh6P54276 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.18■□□□□ 0.18
Msh6P54276 Gm24749-201ENSMUST00000157838 343 ntBASIC16.18■□□□□ 0.18
Msh6P54276 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Msh6P54276 Gm37666-201ENSMUST00000194110 866 ntBASIC16.18■□□□□ 0.18
Msh6P54276 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.18■□□□□ 0.18
Msh6P54276 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Msh6P54276 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Msh6P54276 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Msh6P54276 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Gm13296-201ENSMUST00000117854 997 ntBASIC16.17■□□□□ 0.18
Msh6P54276 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Gm7467-201ENSMUST00000185173 652 ntBASIC16.17■□□□□ 0.18
Msh6P54276 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.17■□□□□ 0.18
Msh6P54276 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.17■□□□□ 0.18
Msh6P54276 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.17■□□□□ 0.18
Msh6P54276 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Msh6P54276 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh6P54276 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Gm12616-201ENSMUST00000118594 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.16■□□□□ 0.18
Msh6P54276 Gm12624-201ENSMUST00000177615 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12621-201ENSMUST00000177760 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12615-201ENSMUST00000177970 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12622-201ENSMUST00000177975 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12627-201ENSMUST00000178412 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Msh6P54276 Gm12625-201ENSMUST00000179122 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12614-201ENSMUST00000179586 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Gm12613-201ENSMUST00000180323 382 ntBASIC16.16■□□□□ 0.18
Msh6P54276 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.16■□□□□ 0.18
Msh6P54276 Gm39404-201ENSMUST00000216350 313 ntBASIC16.16■□□□□ 0.18
Msh6P54276 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms