Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.86□□□□□ -0.35
Fdft1P53798 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Gm8463-201ENSMUST00000208573 613 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Gm45384-201ENSMUST00000210451 277 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fdft1P53798 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.86□□□□□ -0.35
Fdft1P53798 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fdft1P53798 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fdft1P53798 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Fdft1P53798 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Fdft1P53798 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fdft1P53798 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Fdft1P53798 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Gm38671-201ENSMUST00000200573 130 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Gm16372-201ENSMUST00000073088 450 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fdft1P53798 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.85□□□□□ -0.35
Fdft1P53798 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.84□□□□□ -0.35
Fdft1P53798 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.84□□□□□ -0.35
Fdft1P53798 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Fdft1P53798 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.84□□□□□ -0.35
Fdft1P53798 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.84□□□□□ -0.35
Fdft1P53798 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.84□□□□□ -0.35
Fdft1P53798 Gm44069-201ENSMUST00000204898 506 ntBASIC12.84□□□□□ -0.35
Fdft1P53798 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.84□□□□□ -0.35
Fdft1P53798 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.84□□□□□ -0.35
Fdft1P53798 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.84□□□□□ -0.35
Fdft1P53798 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fdft1P53798 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Fdft1P53798 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.84□□□□□ -0.35
Fdft1P53798 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fdft1P53798 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Fdft1P53798 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fdft1P53798 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms