Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox3P53784 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox3P53784 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox3P53784 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox3P53784 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox3P53784 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sox3P53784 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox3P53784 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox3P53784 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Gm4909-201ENSMUST00000118749 794 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sox3P53784 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox3P53784 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Mir7032-201ENSMUST00000185154 79 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Sox3P53784 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Gm24447-201ENSMUST00000083977 338 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox3P53784 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox3P53784 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox3P53784 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.33□□□□□ -0.44
Sox3P53784 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sox3P53784 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Gm13369-201ENSMUST00000119442 987 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Gm4986-201ENSMUST00000119731 549 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Gm14017-201ENSMUST00000121934 386 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox3P53784 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Sox3P53784 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Sox3P53784 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox3P53784 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Gm5523-201ENSMUST00000180415 997 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Gm37489-201ENSMUST00000191883 159 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.32□□□□□ -0.44
Sox3P53784 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox3P53784 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Sox3P53784 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox3P53784 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms