Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12990-201ENSMUST00000120372 468 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Gm13937-201ENSMUST00000121000 988 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox1P53783 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 Gm5733-201ENSMUST00000190232 939 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Gm19087-201ENSMUST00000191430 946 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Gm42518-201ENSMUST00000196277 938 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.09□□□□□ -0.31
Sox1P53783 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.09□□□□□ -0.31
Sox1P53783 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Sox1P53783 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
Sox1P53783 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox1P53783 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox1P53783 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.08□□□□□ -0.32
Sox1P53783 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox1P53783 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox1P53783 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox1P53783 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox1P53783 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox1P53783 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Sox1P53783 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox1P53783 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox1P53783 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox1P53783 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Sox1P53783 Gm6630-201ENSMUST00000119199 454 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm14999-201ENSMUST00000121039 624 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox1P53783 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox1P53783 Gm25881-201ENSMUST00000157783 103 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox1P53783 Gm8584-201ENSMUST00000171982 758 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm23771-201ENSMUST00000178702 110 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm28388-201ENSMUST00000186262 437 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm18204-201ENSMUST00000209835 793 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Gm35713-201ENSMUST00000210516 199 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sox1P53783 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.07□□□□□ -0.32
Sox1P53783 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sox1P53783 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox1P53783 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox1P53783 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms