Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.18□□□□□ -0.46
RoraP51448 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.18□□□□□ -0.46
RoraP51448 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.18□□□□□ -0.46
RoraP51448 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.18□□□□□ -0.46
RoraP51448 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.18□□□□□ -0.46
RoraP51448 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.18□□□□□ -0.46
RoraP51448 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Gm45865-201ENSMUST00000211815 945 ntBASIC12.18□□□□□ -0.46
RoraP51448 Gm10608-202ENSMUST00000213924 676 ntBASIC12.18□□□□□ -0.46
RoraP51448 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.18□□□□□ -0.46
RoraP51448 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.18□□□□□ -0.46
RoraP51448 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RoraP51448 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.18□□□□□ -0.46
RoraP51448 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RoraP51448 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.18□□□□□ -0.46
RoraP51448 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RoraP51448 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RoraP51448 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Snord83b-201ENSMUST00000104546 94 ntBASIC12.17□□□□□ -0.46
RoraP51448 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Gm13297-201ENSMUST00000120205 934 ntBASIC12.17□□□□□ -0.46
RoraP51448 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.17□□□□□ -0.46
RoraP51448 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Mospd4-201ENSMUST00000180618 576 ntBASIC12.17□□□□□ -0.46
RoraP51448 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RoraP51448 Gm38341-201ENSMUST00000195357 515 ntBASIC12.17□□□□□ -0.46
RoraP51448 Gm44364-201ENSMUST00000198368 141 ntBASIC12.17□□□□□ -0.46
RoraP51448 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
RoraP51448 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.17□□□□□ -0.46
RoraP51448 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RoraP51448 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.17□□□□□ -0.46
RoraP51448 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.17□□□□□ -0.46
RoraP51448 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RoraP51448 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RoraP51448 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.16□□□□□ -0.46
RoraP51448 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RoraP51448 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
RoraP51448 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
RoraP51448 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
RoraP51448 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
RoraP51448 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.16□□□□□ -0.46
RoraP51448 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RoraP51448 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.16□□□□□ -0.46
RoraP51448 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.16□□□□□ -0.46
RoraP51448 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.16□□□□□ -0.46
RoraP51448 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
RoraP51448 Gm22121-201ENSMUST00000175148 54 ntBASIC12.16□□□□□ -0.46
RoraP51448 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.16□□□□□ -0.46
RoraP51448 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms