Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm14057-201ENSMUST00000120631 482 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm15487-201ENSMUST00000122373 465 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Mir7023-201ENSMUST00000185093 64 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl5P50228 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.24□□□□□ -0.61
Cxcl5P50228 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Gm15240-201ENSMUST00000118156 720 ntBASIC11.23□□□□□ -0.61
Cxcl5P50228 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcl5P50228 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.23□□□□□ -0.61
Cxcl5P50228 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl5P50228 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl5P50228 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.22□□□□□ -0.61
Cxcl5P50228 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms