Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gm15240-201ENSMUST00000118156 720 ntBASIC10.66□□□□□ -0.7
Nkx2-1P50220 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gm6888-201ENSMUST00000221983 706 ntBASIC10.66□□□□□ -0.7
Nkx2-1P50220 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.66□□□□□ -0.7
Nkx2-1P50220 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm27321-201ENSMUST00000185021 205 ntBASIC10.65□□□□□ -0.7
Nkx2-1P50220 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.65□□□□□ -0.7
Nkx2-1P50220 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.65□□□□□ -0.7
Nkx2-1P50220 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-1P50220 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Nkx2-1P50220 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-1P50220 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm17837-201ENSMUST00000186435 985 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms